Search metabolite in HMDB

search_hmdb_database(
  name = "5-methoxysalicylic acid",
  mz = 168.042625,
  data_database,
  mz_error_cutoff = 100,
  similarity_score_cutoff = 0.5
)

Arguments

name

metabolite name

mz

mz

data_database

data_database, metID format

mz_error_cutoff

mz_error_cutoff

similarity_score_cutoff

similarity_score_cutoff

Value

a data frmae

Author

Xiaotao Shen shenxt1990@outlook.com